Occurrence and diversity of Frankia in Tunisian soil

作者: Maher Gtari , Daniele Daffonchio , Abdellatif Boudabous

DOI: 10.1111/J.1399-3054.2006.00845.X

关键词:

摘要: There is a lack of studies on the occurrence and diversity Frankia in African soils, including those northern regions. The present study Tunisian soils an attempt to address this issue using AInus glutinosa, Elaeagnus angustifolia Casuarina glauca plant capturing bioassay 30 soil samples, followed by amplified 16S ribosomal DNA restriction pattern analysis (ARDRA). A total seven ARDRA haplotypes have been detected root actinorhizas that affiliated theoretical upon silico digestion selected RNA (rRNA) gene sequences retrieved from GeneBank confirmed their partial rRNA sequencing. F/aeagnus-compatible isolates were widespread form four Frankia, colonizing Elaeagnaceae Rhamnaceae two different phylogenetic subgroups. Alnus-compatible strains occurring subhumid area closely related AInus-Morella-compatible clustered haplotypes. Casuarina-compatible variability several arboreta. relatively wide opens perspective could be interesting reservoir for isolation new actinorhizal used as potential biofertilizers counteract progressive desertification which indeed crucial environmental problem Northern Africa.

参考文章(17)
D. Daffonchio, M. Gtari, L. Brusetti, A. Boudabous, M. E. Aouani, Frankia nodulating Alnus glutinosa and Casuarinaceae in Tunisia Annals of Microbiology. ,vol. 52, pp. 145- 153 ,(2002)
D. Hahn, M. J. C. Starrenburg, A. D. L. Akkermans, Variable compatibility of clonedAlnus glutinosa ecotypes against ineffectiveFrankia strains Plant and Soil. ,vol. 107, pp. 233- 243 ,(1988) , 10.1007/BF02370552
Néstor-Octavio Pérez, Hiram Olivera, Luis Vásquez, María Valdés, Genetic characterization of Mexican Frankia strains nodulating Casuarina equisetifolia Botany. ,vol. 77, pp. 1214- 1219 ,(1999) , 10.1139/B99-075
Kerstin Huss-Danell, David D Myrold, None, Intrageneric variation in nodulation of Alnus: consequences for quantifying Frankia nodulation units in soil Soil Biology & Biochemistry. ,vol. 26, pp. 525- 531 ,(1994) , 10.1016/0038-0717(94)90238-0
Y.R. Dommergues, Contribution of actinorhizal plants to tropical soil productivity and rehabilitation Soil Biology & Biochemistry. ,vol. 29, pp. 931- 941 ,(1997) , 10.1016/S0038-0717(96)00227-1
Dittmar Hahn, Anja Nickel, Jeffrey Dawson, Assessing Frankia populations in plants and soil using molecular methods FEMS Microbiology Ecology. ,vol. 29, pp. 215- 227 ,(1999) , 10.1111/J.1574-6941.1999.TB00613.X
Maher Gtari, Lorenzo Brusetti, Abdenaceur Hassen, Diego Mora, Daniele Daffonchio, Abdellatif Boudabous, Genetic diversity among Elaeagnus compatible Frankia strains and sympatric-related nitrogen-fixing actinobacteria revealed by nifH sequence analysis Soil Biology & Biochemistry. ,vol. 39, pp. 372- 377 ,(2007) , 10.1016/J.SOILBIO.2006.07.005
Maher Gtari, Lorenzo Brusetti, Gharbi Skander, Diego Mora, Abdellatif Boudabous, Daniele Daffonchio, Isolation of Elaeagnus-compatible Frankia from soils collected in Tunisia. Fems Microbiology Letters. ,vol. 234, pp. 349- 355 ,(2004) , 10.1111/J.1574-6968.2004.TB09554.X