Combining phylogenetic and demographic inferences to assess the origin of the genetic diversity in an isolated wolf population

作者: Luca Montana , Romolo Caniglia , Marco Galaverni , Elena Fabbri , Atidje Ahmed

DOI: 10.1371/JOURNAL.PONE.0176560

关键词:

摘要: The survival of isolated small populations is threatened by both demographic and genetic factors. Large carnivores declined for centuries in most Europe due to habitat changes, overhunting their natural prey direct persecution. However, the current rewilding trends are driving many carnivore expand again, possibly reverting erosion diversity. In this study we reassessed extent origin variation Italian wolf population, which expanding after decline isolation. We genotyped wolves from Italy other nine at four mtDNA regions (control-region, ATP6, COIII ND4) 39 autosomal microsatellites. Results phylogenetic analyses assignment procedures confirmed a second private haplotype, belongs haplogroup distributed mostly southern Europe. Coalescent showed that unique haplotypes likely originated during late Pleistocene. ABC simulations concordantly extant south-western started be right last glacial maximum. Thus, standing principally results historical isolation south Alps.

参考文章(79)
Jennifer A. Leonard, Ecology drives evolution in grey wolves Evolutionary Ecology Research. ,vol. 16, pp. 461- 473 ,(2015)
Ettore RANDI, Genetics and conservation of wolves Canis lupus in Europe Mammal Review. ,vol. 41, pp. 99- 111 ,(2011) , 10.1111/J.1365-2907.2010.00176.X
Marco Galaverni, Romolo Caniglia, Elena Fabbri, Pietro Milanesi, Ettore Randi, One, no one, or one hundred thousand: how many wolves are there currently in Italy? Mammal Research. ,vol. 61, pp. 13- 24 ,(2016) , 10.1007/S13364-015-0247-8
Lewis J. Bartlett, David R. Williams, Graham W. Prescott, Andrew Balmford, Rhys E. Green, Anders Eriksson, Paul J. Valdes, Joy S. Singarayer, Andrea Manica, Robustness despite uncertainty: regional climate data reveal the dominant role of humans in explaining global extinctions of Late Quaternary megafauna Ecography. ,vol. 39, pp. 152- 161 ,(2016) , 10.1111/ECOG.01566
Luigi Boitani, Wolf research and conservation in Italy Biological Conservation. ,vol. 61, pp. 125- 132 ,(1992) , 10.1016/0006-3207(92)91102-X
Jean-Marie Cornuet, Virginie Ravignie, Arnaud Estoup, Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0). BMC Bioinformatics. ,vol. 11, pp. 401- 401 ,(2010) , 10.1186/1471-2105-11-401
Masatoshi Nei, Wen-Hsiung Li, Mathematical model for studying genetic variation in terms of restriction endonucleases Proceedings of the National Academy of Sciences of the United States of America. ,vol. 76, pp. 5269- 5273 ,(1979) , 10.1073/PNAS.76.10.5269
Kevin R. Crooks, Christopher L. Burdett, David M. Theobald, Carlo Rondinini, Luigi Boitani, Global patterns of fragmentation and connectivity of mammalian carnivore habitat Philosophical Transactions of the Royal Society B. ,vol. 366, pp. 2642- 2651 ,(2011) , 10.1098/RSTB.2011.0120
L. D. Mech, U. S. Seal, Premature Reproductive Activity in Wild Wolves Journal of Mammalogy. ,vol. 68, pp. 871- 873 ,(1987) , 10.2307/1381570