Temporal dynamics, diversity, and interplay in three components of the virodiversity of a Mallard population: influenza A virus, avian paramyxovirus and avian coronavirus

作者: Michelle Wille , Alexis Avril , Conny Tolf , Anna Schager , Sara Larsson

DOI: 10.1016/J.MEEGID.2014.11.014

关键词:

摘要: Multiple infections, or simultaneous infection of a host with multiple parasites, are the rule rather than exception. Interactions between co-occurring pathogens in population may be mutualistic, competitive facilitative. For some pathogen combinations, these interrelated effects will have epidemiological consequences; however this is as yet poorly incorporated into practical disease ecology. example, screening Mallards for influenza A viruses (IAV) repeatedly revealed high prevalence and large subtype diversity Northern Hemisphere. Other studies identified avian paramyxovirus type 1 (APMV-1) coronaviruses (CoVs) Mallards, but without making inferences on larger viral assemblage. In study we followed 144 wild across an autumn season natural stopover site constructed histories IAV, APMV-1 CoV. There was comprising 27 while had comparatively low (with peak 2%) limited strain variation, similar to previous findings. Avian CoVs were common, up 12%, sequence analysis different putative genetic lineages. An investigation dynamics co-infections synergistic effect CoV whereby higher given that birds co-infected IAV. no interactive IAV APMV-1. Disease result interplay immune responses, resources; imperative begin include all factors better understand infectious risk.

参考文章(60)
Kazutaka Katoh, George Asimenos, Hiroyuki Toh, Multiple Alignment of DNA Sequences with MAFFT Methods in Molecular Biology. ,vol. 537, pp. 39- 64 ,(2009) , 10.1007/978-1-59745-251-9_3
Infectious Diseases of Wild Birds Blackwell Publishing Professional. pp. 1- 484 ,(2007) , 10.1002/9780470344668
Peter McCullagh, John Ashworth Nelder, Generalized Linear Models ,(1983)
Thomas W. Yee, The VGAM Package for Categorical Data Analysis Journal of Statistical Software. ,vol. 32, pp. 1- 34 ,(2010) , 10.18637/JSS.V032.I10
M. França, E. W. Howerth, D. Carter, A. Byas, R. Poulson, C. L. Afonso, D. E. Stallknecht, Co-infection of mallards with low-virulence Newcastle disease virus and low-pathogenic avian influenza virus Avian Pathology. ,vol. 43, pp. 96- 104 ,(2014) , 10.1080/03079457.2013.876530
Nancy Drilling, Rodger D. Titman, Frank McKinney, Mallard (Anas platyrhynchos) The Birds of North America Online. ,(2018) , 10.2173/BNA.MALLAR3.01.1
Michael Boots, Fight or learn to live with the consequences Trends in Ecology and Evolution. ,vol. 23, pp. 248- 250 ,(2008) , 10.1016/J.TREE.2008.01.006
Michelle Wille, Conny Tolf, Alexis Avril, Neus Latorre-Margalef, Sofie Wallerström, Björn Olsen, Jonas Waldenström, Frequency and patterns of reassortment in natural influenza A virus infection in a reservoir host Virology. ,vol. 443, pp. 150- 160 ,(2013) , 10.1016/J.VIROL.2013.05.004
M. R. W. Barber, J. R. Aldridge, R. G. Webster, K. E. Magor, Association of RIG-I with innate immunity of ducks to influenza Proceedings of the National Academy of Sciences of the United States of America. ,vol. 107, pp. 5913- 5918 ,(2010) , 10.1073/PNAS.1001755107
Adolfo Garcia-Sastre, None, Induction and evasion of type I interferon responses by influenza viruses Virus Research. ,vol. 162, pp. 12- 18 ,(2011) , 10.1016/J.VIRUSRES.2011.10.017