引用次数
引用: 457
H-指数: 14
I10-指数 : 16
出版物: 42
Derivation of process algebraic models of biochemical systems
Ritesh V Krishna
Department of Computer Science
2005
A Partial Granger Causality Approach to Explore Causal Networks Derived From Multi-parameter Data
Ritesh Krishna , Shuixia Guo
computational methods in systems biology 9 -27
9
2008
jmzIdentML API: A Java interface to the mzIdentML standard for peptide and protein identification data
Florian Reisinger , Ritesh Krishna , Fawaz Ghali , Daniel Ríos
Proteomics 12 ( 6) 790 -794
27
2012
A guide for integration of proteomic data standards into laboratory workflows
J. Alberto Medina-Aunon , Ritesh Krishna , Fawaz Ghali , Juan P. Albar
Proteomics 13 480 -492
7
2013
The jmzQuantML programming interface and validator for the mzQuantML data standard.
Da Qi , Ritesh Krishna , Andrew R Jones
Proteomics 14 ( 6) 685 -688
8
2014
Large-scale and significant expression from pseudogenes in Sodalis glossinidius – a facultative bacterial endosymbiont
Ian Goodhead , Frances Blow , Philip Brownridge , Margaret Hughes
Microbial genomics 6 ( 1)
5
2020
Hierarchically Labeled Database Indexing Allows Scalable Characterization of Microbiomes.
Filippo Utro , Niina Haiminen , Enrico Siragusa , Laura-Jayne Gardiner
iScience 23 ( 4) 100988
6
2020
A partial Granger causality based method for analysis of parameter interactions in bioreactors
Ritesh Krishna , Satyadarshi Nanda , Abhijit Kulkarni , Sangameshwar Patil
Computers & Chemical Engineering 35 ( 1) 121 -126
3
2011
ProteoAnnotator--open source proteogenomics annotation software supporting PSI standards.
Fawaz Ghali , Ritesh Krishna , Simon Perkins , Andrew Collins
Proteomics 14 2731 -2741
42
2014
A large-scale proteogenomics study of apicomplexan pathogens-Toxoplasma gondii and Neospora caninum.
Ritesh Krishna , Dong Xia , Sanya Sanderson , Achchuthan Shanmugasundram
Proteomics 15 ( 15) 2618 -2628
13
2015
Using human in vitro transcriptome analysis to build trustworthy machine learning models for prediction of animal drug toxicity
Laura-Jayne Gardiner , Anna Paola Carrieri , Jenny Wilshaw , Stephen Checkley
Scientific Reports 10 ( 1) 9522
11
2020
Accelerating molecular discovery through data and physical sciences: Applications to peptide-membrane interactions.
Flaviu Cipcigan , Anna Paola Carrieri , Edward O. Pyzer-Knapp , Ritesh Krishna
Journal of Chemical Physics 148 ( 24) 241744
9
2018
Interaction Based Functional Clustering of Genomic Data
Ritesh Krishna , Chang-Tsun Li , Vicky Buchanan-Wollaston
bioinformatics and bioengineering 130 -137
1
2009
A temporal precedence based clustering method for gene expression microarray data
Ritesh Krishna , Chang-Tsun Li , Vicky Buchanan-Wollaston
BMC Bioinformatics 11 ( 1) 68 -68
10
2010
The sequence of a male-specific genome region containing the sex determination switch in Aedes aegypti
Joe Turner , Ritesh Krishna , Arjen E. van’t Hof , Elizabeth R. Sutton
Parasites & Vectors 11 ( 1) 549
2
2018
Listen to Genes: Dealing with Microarray Data in the Frequency Domain
Jianfeng Feng , Dongyun Yi , Ritesh Krishna , Shuixia Guo
PLoS ONE 4 ( 4) e5098
11
2009
Re-purposing software for functional characterization of the microbiome
Laura-Jayne Gardiner , Niina Haiminen , Filippo Utro , Laxmi Parida
Microbiome 9 ( 1) 1 -12
1
2021
Tools (Viewer, Library and Validator) that Facilitate Use of the Peptide and Protein Identification Standard Format, Termed mzIdentML
Fawaz Ghali , Ritesh Krishna , Pieter Lukasse , Salvador Martínez-Bartolomé
Molecular & Cellular Proteomics 12 ( 11) 3026 -3035
33
2013
Recovering individual haplotypes and a contiguous genome assembly from pooled long read sequencing of the diamondback moth (Lepidoptera: Plutellidae)
Samuel Whiteford , Arjen E. van’t Hof , Ritesh Krishna , Thea Marubbi
bioRxiv 867879
2
2019
Stage-specific proteomes from Onchocerca ochengi, sister species of the human river blindness parasite, uncover adaptations to a nodular lifestyle
Stuart D. Armstrong , Dong Xia , Germanus S. Bah , Ritesh Krishna
Molecular & Cellular Proteomics 15 ( 8) 2554 -2575
17
2016