Identification of two novel equine papillomavirus sequences suggests three genera in one cluster.

作者: Christian E. Lange , Kurt Tobler , Mathias Ackermann , Claude Favrot

DOI: 10.1016/J.VETMIC.2010.10.019

关键词: Sequence analysisPapovaviridaeGenomeORFSOpen reading frameGeneticsPhylogeneticsEquidaeVirologyPhylogenetic treeBiology

摘要: The number of recognized papillomavirus (PV) species and potential PV genera has dramatically been increasing throughout the past decade. It seems that every host might potentially harbour a large set PVs, while PVs each appear to belong only few genera. In horses at least three conditions beside equine sarcoid have described, being supposedly induced namely classical papillomas, genital papillomas aural plaques. We were able identify DNA novel (EcPVs) in two latter disorders where involvement had predicted. Both genomes entirely cloned sequenced. EcPV genomes, one derived from penile papilloma, other an ear papilloma contain characteristic open reading frames (ORFs) E6, E7, E1, E2, L2 L1, non-coding region between late early as well small region. viruses consequently designated EcPV2 EcPV3. analysed compared with further PVs. Upon phylogenetic analyses group together. Pairwise alignment L1 nucleotide sequences reveals EcPV1 shares 54.9% identities 53.2% EcPV3 share 51.3% identities. As EcPVs less than 60% they may be regarded belonging different

参考文章(26)
ATTILA T. LORINCZ, RICHARD REID, BENNETT A. JENSON, MITCHELL D. GREENBERG, WAYNE LANCASTER, ROBERT J. KURMAN, Human papillomavirus infection of the cervix: relative risk associations of 15 common anogenital types. Obstetrics & Gynecology. ,vol. 79, pp. 328- 337 ,(1992) , 10.1097/00006250-199203000-00002
Santiago García-Vallvé, Ángel Alonso, Ignacio G. Bravo, Papillomaviruses: different genes have different histories Trends in Microbiology. ,vol. 13, pp. 514- 521 ,(2005) , 10.1016/J.TIM.2005.09.003
Károly Erdélyi, Ádám Bálint, László Dencső, Ádám Dán, Krisztina Ursu, Characterisation of the first complete genome sequence of the roe deer (Capreolus capreolus) papillomavirus Virus Research. ,vol. 135, pp. 307- 311 ,(2008) , 10.1016/J.VIRUSRES.2008.03.002
Hans-Ulrich Bernard, Robert D. Burk, Zigui Chen, Koenraad van Doorslaer, Harald zur Hausen, Ethel-Michele de Villiers, Classification of Papillomaviruses (PVs) Based on 189 PV Types and Proposal of Taxonomic Amendments Virology. ,vol. 401, pp. 70- 79 ,(2010) , 10.1016/J.VIROL.2010.02.002
Elliot J. Androphy, Douglas R. Lowy, John T. Schiller, Bovine papillomavirus E2 trans -activating gene product binds to specific sites in papillomavirus DNA Nature. ,vol. 325, pp. 70- 73 ,(1987) , 10.1038/325070A0
Lubna Nasir, M Saveria Campo, Bovine papillomaviruses: their role in the aetiology of cutaneous tumours of bovids and equids Veterinary Dermatology. ,vol. 19, pp. 243- 254 ,(2008) , 10.1111/J.1365-3164.2008.00683.X
M.Kerry O'banion, M.E. Reichmann, John P. Sundberg, Cloning and characterization of an equine cutaneous papillomavirus. Virology. ,vol. 152, pp. 100- 109 ,(1986) , 10.1016/0042-6822(86)90375-2
L. Bogaert, A. Martens, M. Van Poucke, R. Ducatelle, H. De Cock, J. Dewulf, C. De Baere, L. Peelman, F. Gasthuys, High prevalence of bovine papillomaviral DNA in the normal skin of equine sarcoid-affected and healthy horses Veterinary Microbiology. ,vol. 129, pp. 58- 68 ,(2008) , 10.1016/J.VETMIC.2007.11.008
D. Posada, K. A. Crandall, MODELTEST: testing the model of DNA substitution. Bioinformatics. ,vol. 14, pp. 817- 818 ,(1998) , 10.1093/BIOINFORMATICS/14.9.817