Comparison of Sanger Sequencing, Pyrosequencing, and Melting Curve Analysis for the Detection of KRAS Mutations

作者: Athanasios C. Tsiatis , Alexis Norris-Kirby , Roy G. Rich , Michael J. Hafez , Christopher D. Gocke

DOI: 10.2353/JMOLDX.2010.090188

关键词: DNA Mutational AnalysisGeneticsMutationKRASPyrosequencingBiologyMolecular biologyAlleleMelting curve analysisSanger sequencingFalse positive paradoxPathology and Forensic MedicineMolecular medicine

摘要: … Finally, using an electronic cutoff of 10%, Sanger sequencing … for Sanger sequencing, pyrosequencing, and melting curve analysis was approximately 15 to 20%, 5%, and 10% mutant …

参考文章(21)
R. Rosell, J. Maestre, A. Ariza, A. Barnadas, M. Canela, E. Tolosa, J. L. Mate, P. Armengol, Z. Skacel, Shanrong Li, Prognostic impact of mutated K-ras gene in surgically resected non-small cell lung cancer patients. Oncogene. ,vol. 8, pp. 2407- 2412 ,(1993)
T Minamoto, Z Ronai, M Mai, K-ras mutation: early detection in molecular diagnosis and risk assessment of colorectal, pancreas, and lung cancers--a review. Cancer Detection and Prevention. ,vol. 24, pp. 1- 12 ,(2000)
J Maurel, A Pifarré, R Rosell, M Monzó, A Abad, J M de Anta, A Ariza, M P López, J J Sánchez, I Moreno, Molecular staging of non-small cell lung cancer according to K-ras genotypes. Clinical Cancer Research. ,vol. 2, pp. 1083- 1086 ,(1996)
Adi F. Gazdar, Arvind K. Virmani, Yosuke Kishimoto, Jaclyn Y. Hung, Kenji Sugio, K-ras Mutations Are a Relatively Late Event in the Pathogenesis of Lung Carcinomas Cancer Research. ,vol. 54, pp. 5811- 5815 ,(1994)
Kristine Kleivi, Manuel R Teixeira, Mette Eknæs, Chieu B Diep, Kjetill S Jakobsen, Richard Hamelin, Ragnhild A Lothe, None, Genome signatures of colon carcinoma cell lines. Cancer Genetics and Cytogenetics. ,vol. 155, pp. 119- 131 ,(2004) , 10.1016/J.CANCERGENCYTO.2004.03.014
Shuji Ogino, Takako Kawasaki, Mohan Brahmandam, Liying Yan, Mami Cantor, Chungdak Namgyal, Mari Mino-Kenudson, Gregory Y. Lauwers, Massimo Loda, Charles S. Fuchs, Sensitive Sequencing Method for KRAS Mutation Detection by Pyrosequencing The Journal of Molecular Diagnostics. ,vol. 7, pp. 413- 421 ,(2005) , 10.1016/S1525-1578(10)60571-5
Ronald W. Ellis, Deborah DeFeo, Thomas Y. Shih, Matthew A. Gonda, Howard A. Young, Nobuo Tsuchida, Douglas R. Lowy, Edward M. Scolnick, The p21 src genes of Harvey and Kirsten sarcoma viruses originate from divergent members of a family of normal vertebrate genes Nature. ,vol. 292, pp. 506- 511 ,(1981) , 10.1038/292506A0
Sandrine Dufort, Marie-Jeanne Richard, Florence de Fraipont, Pyrosequencing method to detect KRAS mutation in formalin-fixed and paraffin-embedded tumor tissues. Analytical Biochemistry. ,vol. 391, pp. 166- 168 ,(2009) , 10.1016/J.AB.2009.05.027
Johannes L. Bos, Eric R. Fearon, Stanley R. Hamilton, Matty Verlaan–de Vries, Jacques H. van Boom, Alex J. van der Eb, Bert Vogelstein, Prevalence of ras gene mutations in human colorectal cancers Nature. ,vol. 327, pp. 293- 297 ,(1987) , 10.1038/327293A0