Combining bulk segregation analysis and microarrays for mapping of the pH trait in melon
作者： Amir Sherman , Ravit Eshed , Rotem Harel-Beja , Galil Tzuri , Vitaly Portnoy
DOI: 10.1007/S00122-012-1983-7
关键词:
摘要: The availability of sequence information for many plants has opened the way to advanced genetic analysis in non-model plants. Nevertheless, exploration variation on a large scale and its use as tool identification traits interest are still rare. In this study, we combined bulk segregation approach with our own-designed microarrays map pH locus that influences fruit melon. Using these technologies, identified set markers genetically linked trait. Further using melon cultivars demonstrated some tightly trait throughout germplasm collection. These results validate utility combining microarray technology mapping
springer.com
cabdirect.org
researchgate.net 
sci-hub.se 参考文章(63)
Yael Danin-Poleg, Yaakov Tadmor, Galil Tzuri, Noa Reis, Joseph Hirschberg, Nurit Katzir, Construction of a genetic map of melon with molecular markers and horticultural traits, and localization of genes associated with ZYMV resistance Euphytica. ,vol. 125, pp. 373- 384 ,(2002) , 10.1023/A:1016021926815
M. Pitrat, P. Hanelt, K. Hammer, Some comments on infraspecific classification of cultivars of melon. Cucurbitaceae 2000. Proceedings of the 7th EUCARPIA meeting on cucurbit breeding and genetics, Ma'ale Ha Hamisha, Israel, 19-23 March, 2000.. pp. 29- 36 ,(2000) , 10.17660/ACTAHORTIC.2000.510.4
Yosef Burger, Harry S. Paris, Ron Cohen, Nurit Katzir, Yaakov Tadmor, Efraim Lewinsohn, Arthur A. Schaffer, Genetic Diversity ofCucumis Melo Horticultural Reviews. ,vol. 36, pp. 165- 198 ,(2010) , 10.1002/9780470527238.CH3
Yee Hwa Yang, Terry Speed, None, Design issues for cDNA microarray experiments. Nature Reviews Genetics. ,vol. 3, pp. 579- 588 ,(2002) , 10.1038/NRG863
N.H. Chapman, E.A. Thompson, Linkage disequilibrium mapping: the role of population history, size, and structure. Advances in Genetics. ,vol. 42, pp. 413- 437 ,(2001) , 10.1016/S0065-2660(01)42034-7
Yee Hwa Yang, Natalie P. Thorne, Normalization for two-color cDNA microarray data Institute of Mathematical Statistics. pp. 403- 418 ,(2003) , 10.1214/LNMS/1215091155
R. Harel-Beja, G. Tzuri, V. Portnoy, M. Lotan-Pompan, S. Lev, S. Cohen, N. Dai, L. Yeselson, A. Meir, S. E. Libhaber, E. Avisar, T. Melame, P. van Koert, H. Verbakel, R. Hofstede, H. Volpin, M. Oliver, A. Fougedoire, C. Stalh, J. Fauve, B. Copes, Z. Fei, J. Giovannoni, N. Ori, E. Lewinsohn, A. Sherman, J. Burger, Y. Tadmor, A. A. Schaffer, N. Katzir, A genetic map of melon highly enriched with fruit quality QTLs and EST markers, including sugar and carotenoid metabolism genes Theoretical and Applied Genetics. ,vol. 121, pp. 511- 533 ,(2010) , 10.1007/S00122-010-1327-4
Jared W. Wenger, Katja Schwartz, Gavin Sherlock, Bulk Segregant Analysis by High-Throughput Sequencing Reveals a Novel Xylose Utilization Gene from Saccharomyces cerevisiae PLoS Genetics. ,vol. 6, pp. e1000942- ,(2010) , 10.1371/JOURNAL.PGEN.1000942
François L Luro, Gilles Costantino, Javier Terol, Xavier Argout, Thierry Allario, Patrick Wincker, Manuel Talon, Patrick Ollitrault, Raphael Morillon, Transferability of the EST-SSRs developed on Nules clementine (Citrus clementina Hort ex Tan) to other Citrus species and their effectiveness for genetic mapping BMC Genomics. ,vol. 9, pp. 287- 287 ,(2008) , 10.1186/1471-2164-9-287
Matthew J. Brauer, Cheryl M. Christianson, Dave A. Pai, Maitreya J. Dunham, Mapping Novel Traits by Array-Assisted Bulk Segregant Analysis in Saccharomyces cerevisiae Genetics. ,vol. 173, pp. 1813- 1816 ,(2006) , 10.1534/GENETICS.106.057927